ProBiS‑Dock Server

Download Setting Info

Receptor conformation distance from ligand output (Å):

Probis scoring level:

Max sequence identity:

Max fragment radius:

GSscore reference state:

GSscore atom types:

Score calculating function:

Scoring function distance cutoff:

Step for spline generation nb kb potential:

Scale nb forces and E for kb potential:

Spin degrees to rotate ligand:

Clash coefficient determining clashes:

Tolerance on seed distance in‑between linking:

Lower tolerance on seed distance:

Upper tolerance on seed distance:

Max possible docked conformations:

Max A* linking iterations:

Cluster radius docked ligand conf.:

Max allowed energy docked seeds:

Max number of weight cliques:

Max steps of MCQDW algorithm:

Minimization tolerance:

Maximum iterations final minimization:

Update non‑bond list frequency:

Force convergence tolerance:

Radius of flexible residues (Å):

Percent top scored docked seeds:

Binding site grid resolution (Å):

Unit vectors n:

Spin degrees fragment conf.:

Excluded radius (Å):

Max interatomic distance (Å):

Distance cutoff ProBiS‑Score (Å):

ProBiS‑Score power decay:

Cluster radius rigid seeds (Å):

Only ligand flexible:

Select your mol2 file

Drag & drop file here or click to select

Select a database to dock

ProBiS‑Dock Human

Human proteins determined as those where source organism listed in the PDB file is HOMO SAPIENS.

Submit a job

Inverse molecular docking server that predicts protein targets of small molecules. It utilizes ProBiS‑Dock algorithm, together with ProBiS‑Dock and ProBiS‑Fold databases.

Workflow diagram

Upload your ligand, choose a database and submit a job. After processing you will be redirected to the results page where you can view, download and visualise them.